CDS

Accession Number TCMCG015C06887
gbkey CDS
Protein Id XP_027103980.1
Location complement(join(3583484..3583636,3584056..3584436,3584538..3584629,3585560..3585623,3585728..3585972,3586397..3586436,3587467..3587536,3587640..3587701,3587814..3587849))
Gene LOC113725175
GeneID 113725175
Organism Coffea arabica

Protein

Length 380aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027248179.1
Definition DNA-directed RNA polymerase III subunit rpc4-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category K
Description RNA polymerase III RPC4
KEGG_TC -
KEGG_Module M00181        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03026        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko04623        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map04623        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0001817        [VIEW IN EMBL-EBI]
GO:0001819        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005666        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032479        [VIEW IN EMBL-EBI]
GO:0032481        [VIEW IN EMBL-EBI]
GO:0032648        [VIEW IN EMBL-EBI]
GO:0032728        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAACCGAATTTGTCCCCTTCTACTCCTAGAAGGGTCAAATTTGCTCCTAAAGGTCCTCCACCCAGGAGGAAGTCCACACCTCTTCAACCCAAAACTGAAGTAGCTGGTGGTGGTGATCATGGCGGAGATGACGAGATTAATGAATCTCTCCTTCGCAAAGTTAACGAGCATCTGACAAGAAGATGGCCTCAAGCTGAGAAAAAATCTTCTGTTCAAGTTGCATTTAGCCATGGAGTTGCATCATCAACTTCTTTAAGGACATATGGCTCAGCTAAGGAAGGTTCCGGTGACAGAAGTAATGGCACGGGATTGAGAGATTCTGCTGCAGATACTAGGTGGGACATCCATTCTTTGCCTTCAACTAGTAAAATTGATTGGATGGTTGAAAGTTCAGAAGATGCCACTGTTACTTCATTCAAGCAGAAGAAGAGAGAATATAAAGAACCTTGGGATTACAACCACAGCTACTATCCTGTTGCTCTTCCCATAAGAAGACCTTACTCTGGAGACCCAGAGGTTCTTGATCGGGAAGAATTTGGGGAGGCTAAAGCAGCTTCGGAGTATGATGAAAGTGCCATACATTCTGCATCAGATCTTGGTCTGCTGGAAGAAGTTGATGGAGAGAAGATGCTTTTTCTTCAATTTCCTGCTAACCTCCCCTTTCTTAAACGGGAATCTGGGCCAGGTTCTACTGGTACATCTGAACATGCTTCAGCCAGCGTGAATCATAAACACAGAGCTGGCAGCTCTAGACCAGGTGGAAGTGTTGCTCCAACCACGGCAAAAGGGAAGGAGATTCCTGGTAGCTTTCCAATGGTTTCAGGTGATGCAAAGGGAAAAGAGATAGTTAACAGCTCCGTGTCTTCTGTTGCTGGCACAAATAAGAATGTATGCAGTTTGGAGGAGTTGCCACCCGGATTCATGGGGAAAATATTGGTCTTTAAGAGTGGTGCAGTTAAGTTGAAGCTCGGAGATATGCTGTACGATGTTTCTCCTGGTTCCAATTGTACGTTTGCTCAGGACATTGTGGCAATCAACACATCAGACAAACACTGCTGCAATCTGGGAGAAGTCAGTAAGCGGGCTGTCGTTACTCCAGATATTGATCATCTACTGACGCCGGTGATTTATCTGGCTTGA
Protein:  
MEPNLSPSTPRRVKFAPKGPPPRRKSTPLQPKTEVAGGGDHGGDDEINESLLRKVNEHLTRRWPQAEKKSSVQVAFSHGVASSTSLRTYGSAKEGSGDRSNGTGLRDSAADTRWDIHSLPSTSKIDWMVESSEDATVTSFKQKKREYKEPWDYNHSYYPVALPIRRPYSGDPEVLDREEFGEAKAASEYDESAIHSASDLGLLEEVDGEKMLFLQFPANLPFLKRESGPGSTGTSEHASASVNHKHRAGSSRPGGSVAPTTAKGKEIPGSFPMVSGDAKGKEIVNSSVSSVAGTNKNVCSLEELPPGFMGKILVFKSGAVKLKLGDMLYDVSPGSNCTFAQDIVAINTSDKHCCNLGEVSKRAVVTPDIDHLLTPVIYLA